Sequence Similarity Clusters for the Entities in PDB 4PTU

Entity #1 | Chains: A
Antibody pn132p2C05, light chain protein, length: 217 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 45796
95 % 1 2 41636 Flexibility: No
Max RMSD: 0.2, Avg RMSD: 0.2
PDBFlex
90 % 8 244 75
70 % 48 2416 2
50 % 59 3067 2
40 % 59 3067 2
30 % 127 6228 1
Entity #2 | Chains: B
Antibody pn132p2C05, heavy chain protein, length: 235 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 37091
95 % 1 2 30792 Flexibility: No
Max RMSD: 0.3, Avg RMSD: 0.3
PDBFlex
90 % 1 2 29609
70 % 59 2965 1
50 % 66 3117 1
40 % 66 3117 1
30 % 128 6228 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 4PTU 1 A Antibody pn132p2C05, light chain 9606
2 4PTT 1 A Antibody pn132p2C05, light chain 9606