Sequence Similarity Clusters for the Entities in PDB 4PRO

Entity #1 | Chains: A,B
ALPHA-LYTIC PROTEASE protein, length: 198 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 8 8 7298
95 % 47 48 1142 Flexibility: No
Max RMSD: 0.5, Avg RMSD: 0.2
PDBFlex
90 % 47 48 1186
70 % 49 50 1037
50 % 50 51 1052
40 % 50 51 1094
30 % 50 51 1134
Entity #2 | Chains: C,D
ALPHA-LYTIC PROTEASE protein, length: 166 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 3 12281
95 % 2 3 12190 Flexibility: Low
Max RMSD: 4.1, Avg RMSD: 2.0
PDBFlex
90 % 2 3 12053
70 % 2 3 11487
50 % 2 3 10517
40 % 2 3 9917
30 % 2 3 9173

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures