Sequence Similarity Clusters for the Entities in PDB 4PPS

Entity #1 | Chains: A,B
Estrogen receptor protein, length: 244 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 36 220 39
95 % 41 262 32 Flexibility: Low
Max RMSD: 7.1, Avg RMSD: 1.4
PDBFlex
90 % 41 262 33
70 % 41 262 42
50 % 44 298 41
40 % 44 298 54
30 % 132 992 10
Entity #2 | Chains: C,D
Nuclear receptor coactivator 2 protein, length: 12 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.