Sequence Similarity Clusters for the Entities in PDB 4PPS

Entity #1 | Chains: A,B
Estrogen receptor protein, length: 244 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 36 220 42
95 % 43 265 21 Flexibility: Low
Max RMSD: 7.1, Avg RMSD: 1.4
PDBFlex
90 % 43 265 23
70 % 43 265 32
50 % 46 301 42
40 % 46 301 56
30 % 136 1006 10
Entity #2 | Chains: C,D
Nuclear receptor coactivator 2 protein, length: 12 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures