4PEI

Dbr1 in complex with synthetic branched RNA analog


Sequence Similarity Clusters for the Entities in PDB 4PEI

Entity #1 | Chains: A,B,C,D,E
RNA lariat debranching enzyme, putative protein, length: 356 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 2 9081
95 % 2 9 1870
90 % 2 9 1916
70 % 2 9 1994
50 % 2 9 2034
40 % 2 9 2066
30 % 2 9 2081
Entity #2 | Chains: V,W,X,Y,Z
RNA (5'-R(*UP*AP*AP*CP*A)-3') rna, length: 5 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #3 | Chains: Q,R,S,T,U
RNA (5'-R(*(G46)P*U)-3') rna, length: 2 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures