Sequence Similarity Clusters for the Entities in PDB 4P8M

Entity #1 | Chains: A,B
Probable decaprenylphosphoryl-beta-D-ribose oxidase protein, length: 480 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 7 22 1137
95 % 8 27 1174 Flexibility: Low
Max RMSD: 2.3, Avg RMSD: 0.7
PDBFlex
90 % 8 27 1214
70 % 8 29 1199
50 % 8 29 1248
40 % 8 29 1298
30 % 8 29 1329

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures