Sequence Similarity Clusters for the Entities in PDB 4OCY

Entity #1 | Chains: H
Fab ADD058 Heavy Chain protein, length: 216 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 52420
95 % 2 2 35151 Flexibility: No
Max RMSD: 0.4, Avg RMSD: 0.4
PDBFlex
90 % 8 16 4336
70 % 1684 3058 1
50 % 3524 6427 1
40 % 3525 6428 1
30 % 3551 6475 1
Entity #2 | Chains: L
Fab ADD058 Light Chain protein, length: 216 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 52017
95 % 122 168 172 Flexibility: Low
Max RMSD: 6.3, Avg RMSD: 2.4
PDBFlex
90 % 130 178 160
70 % 1374 2488 2
50 % 3525 6427 1
40 % 3526 6428 1
30 % 3552 6475 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures