Sequence Similarity Clusters for the Entities in PDB 4O6F

Entity #1 | Chains: A
N-lysine methyltransferase SMYD2 protein, length: 433 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 11 13 4338
95 % 16 21 2876 Flexibility: Low
Max RMSD: 1.8, Avg RMSD: 0.8
PDBFlex
90 % 18 23 2725
70 % 18 23 2771
50 % 18 23 2765
40 % 18 23 2786
30 % 33 42 1489
Entity #2 | Chains: B
Estrogen receptor protein, length: 11 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures