Sequence Similarity Clusters for the Entities in PDB 4O5L

Entity #1 | Chains: L
Fab F045-092 light chain protein, length: 230 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 66034
95 % 1 3 11305 Flexibility: Medium
Max RMSD: 6.8, Avg RMSD: 3.0
PDBFlex
90 % 4 123 183
70 % 9 613 7
50 % 47 3067 2
40 % 47 3067 2
30 % 103 6228 1
Entity #2 | Chains: H
Fab F045-092 heavy chain protein, length: 240 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 66033
95 % 1 3 11108 Flexibility: Medium
Max RMSD: 7.5, Avg RMSD: 3.2
PDBFlex
90 % 1 3 10945
70 % 47 2965 1
50 % 54 3117 1
40 % 54 3117 1
30 % 104 6228 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures