Sequence Similarity Clusters for the Entities in PDB 4O2B

Entity #1 | Chains: A,C
Tubulin alpha-1B chain protein, length: 451 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 43 168 43
95 % 43 262 13 Flexibility: Low
Max RMSD: 3.4, Avg RMSD: 1.0
PDBFlex
90 % 43 265 15
70 % 43 281 13
50 % 43 281 18
40 % 85 562 3
30 % 85 573 8
Entity #2 | Chains: B,D
Tubulin beta-2B chain protein, length: 445 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 37 108 179
95 % 42 260 14 Flexibility: Low
Max RMSD: 3.2, Avg RMSD: 0.7
PDBFlex
90 % 43 273 8
70 % 43 281 12
50 % 43 281 17
40 % 86 562 3
30 % 86 573 8
Entity #3 | Chains: E
Stathmin-4 protein, length: 143 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 32 104 418
95 % 33 118 456 Flexibility: Low
Max RMSD: 4.1, Avg RMSD: 0.9
PDBFlex
90 % 33 118 482
70 % 33 118 521
50 % 33 118 545
40 % 33 118 586
30 % 33 118 603
Entity #4 | Chains: F
Tubulin-tyrosine ligase protein, length: 384 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 32 104 417
95 % 32 104 541 Flexibility: Low
Max RMSD: 7.4, Avg RMSD: 0.8
PDBFlex
90 % 32 104 568
70 % 32 107 571
50 % 32 107 615
40 % 32 107 652
30 % 32 107 668

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 6S8K 1 A Tubulin alpha-1B chain 9913
2 5IYZ 1 A, C Tubulin alpha-1B chain 9913
3 4I4T 1 A, C Tubulin alpha-1B chain 9913
4 5NQU 1 A Tubulin alpha-1B chain 9913
5 5LXT 1 A, C Tubulin alpha-1B chain 9913
6 5EYP 1 A Tubulin alpha chain 9940
7 6QTN 1 A, C Tubulin alpha-1B chain 9913
8 6S8L 1 A Tubulin alpha-1B chain 9606
9 4IHJ 1 A, C Tubulin alpha-1B chain 9913
10 4TV9 1 A, C Tubulin alpha-1B chain 9913
11 5M7E 1 A, C Tubulin alpha-1B chain 9913
12 3RYC 1 A, C Tubulin alpha chain 9940
13 5EZY 1 A, C Tubulin alpha-1B chain 9823
14 4LNU 1 A Tubulin alpha chain 9940
15 5EIB 1 C Tubulin alpha-1B chain 9913
16 6FKL 1 A, C Tubulin alpha-1B chain 9913
17 6FJM 1 A, C Tubulin alpha-1B chain 9913
18 5M8G 1 A, C Tubulin alpha-1B chain 9913
19 5NM5 1 A Tubulin alpha-1B chain 9913
20 5NFZ 1 A, C Tubulin alpha-1B chain 9913
21 4TUY 1 A, C Tubulin alpha-1B chain 9913
22 4DRX 1 A, C Tubulin alpha chain UNP residues 1-437 9940
23 6FKJ 1 A, C Tubulin alpha-1B chain 9913
24 5LA6 1 A, C Tubulin alpha-1B chain 9913
25 6F7C 1 A, C Tubulin alpha-1B chain 9913
26 4I55 1 A, C Tubulin alpha-1B chain 9913
27 4TV8 1 A, C Tubulin alpha-1B chain STATHMIN-LIKE DOMAIN 9913
28 5NQT 1 A Tubulin alpha-1B chain 9913
29 4O4H 1 A, C Tubulin alpha-1B chain 9913
30 5NG1 1 A, C Tubulin alpha-1B chain 9913
31 5OSK 1 A, C Tubulin alpha-1B chain 9913
32 5ITZ 1 A Tubulin alpha-1B chain 9913
33 5M8D 1 A, C Tubulin alpha-1B chain 9913
34 5M7G 1 A, C Tubulin alpha-1B chain 9913
35 5YL2 1 A, C Tubulin alpha-1B chain 9823
36 4O4L 1 A, C Tubulin alpha-1B chain 9913
37 5LXS 1 A, C Tubulin alpha-1B chain 9913
38 5JQG 1 A, C Tubulin alpha-1B chain 9823
39 5JH7 1 A, C Tubulin alpha-1B chain 9913
40 5J2T 1 A, C Tubulin alpha-1B chain 9913
41 5XKG 1 A, C Tubulin alpha-1B chain 9823
42 5JCB 1 A, C Tubulin alpha-1B chain 9823
43 4O2B 1 A, C Tubulin alpha-1B chain 9913
44 4O4J 1 A, C Tubulin alpha-1B chain 9913
45 5MF4 1 A, C Tubulin alpha-1B chain 9913
46 3RYI 1 A, C Tubulin alpha chain 9940
47 5CB4 1 A, C Tubulin alpha 41807
48 5JVD 1 A, C Tubulin alpha-1B chain 9913
49 5XKH 1 A, C Tubulin alpha-1B chain 9823
50 6FII 1 A, C Tubulin alpha-1B chain 9913
51 6O5M 1 A, C Tubulin alpha-1B chain 9823
52 5XP3 1 A, C Tubulin alpha-1B chain 9823
53 4I50 1 A, C Tubulin alpha-1B chain 9913
54 6S9E 1 A, C Tubulin alpha-1B chain 9913
55 6BR1 1 A, C Tubulin alpha-1B chain 9823
56 6QQN 1 A, C Tubulin alpha-1B chain 9913
57 3RYF 1 A, C Tubulin alpha chain 9940
58 4O4I 1 A, C Tubulin alpha-1B chain 9913
59 5LOV 1 A, C Tubulin alpha-1B chain 9913
60 5LYJ 1 A, C Tubulin alpha-1B chain 9913
61 5OV7 1 A, C Tubulin alpha-1B chain 9913
62 6NNG 1 A, C Tubulin alpha-1B chain 9823
63 5CA1 1 A, C Tubulin alpha 41807
64 4ZOL 1 A, C Tubulin alpha-1B chain 9823
65 5XLZ 1 A, C Tubulin alpha-1B chain 9913
66 6HX8 1 A, C Tubulin alpha-1B chain 9913
67 6GJ4 1 A, C Tubulin alpha-1B chain 9913
68 6GF3 1 A, C Tubulin alpha-1B chain 9913
69 4ZI7 1 A, C Tubulin alpha-1B chain 9823
70 6FJF 1 A, C Tubulin alpha-1B chain 9913
71 5BMV 1 A, C Tubulin alpha-1B chain 9913
72 6BRF 1 A, C Tubulin alpha-1B chain 9823
73 6EG5 1 A, C Tubulin alpha-1B chain 9823
74 6GWC 1 A ALPHA-TUBULIN 9940
75 4O2A 1 A, C Tubulin alpha-1B chain 9913
76 4F6R 1 A Tubulin alpha chain 9940
77 5KX5 1 A, C Tubulin alpha chain 9940
78 4ZHQ 1 A, C Tubulin alpha-1B chain 9823
79 5CA0 1 A, C Tubulin alpha-1B chain 9823
80 5NJH 1 A, C Tubulin alpha-1B chain 9913
81 5O7A 1 A, C Tubulin alpha-1B chain 9913
82 5FNV 1 A, C TUBULIN ALPHA-1B CHAIN 9031
83 5GON 1 A, C Tubulin alpha-1B chain UNP RESIDUES 1-440 9913
84 6BS2 1 A, C Tubulin alpha-1B chain 9823
85 4YJ2 1 A, C Tubulin alpha-1B chain 9913
86 6H9B 1 A, C Tubulin alpha chain 9940
87 3RYH 1 A, C Tubulin alpha chain 9940
88 6GZE 1 A, C Tubulin alpha-1B chain 9913
89 4IIJ 1 A, C Tubulin alpha-1B chain 9913
90 5XAF 1 A, C Tubulin alpha-1B chain 9913
91 5J2U 1 A, C Tubulin alpha-1B chain 9913
92 6KNZ 1 A, C Tubulin alpha-1B chain 9913
93 5YZ3 1 A, C Tubulin alpha-1B chain 9913
94 5H74 1 A, C Tubulin alpha-1B chain UNP residues 1-450 9823
95 6N47 1 A, C Tubulin alpha-1B chain 9823
96 3UT5 1 A, C Tubulin alpha chain 9940
97 6O61 1 A, C Tubulin alpha-1B chain 9823
98 5XAG 1 A, C Tubulin alpha-1B chain 9913
99 6GVN 1 A Tubulin alpha chain 9940
100 5Z4P 1 A, C Tubulin alpha-1B chain UNP residues 1-438 9913
101 6BRY 1 A, C Tubulin alpha-1B chain 9823
102 6K9V 1 A, C Tubulin alpha-1B chain 9913
103 6I5C 1 A, C Tubulin alpha-1B chain 9913
104 5XKE 1 A, C Tubulin alpha-1B chain 9823
105 5C8Y 1 A, C Tubulin alpha 41807
106 5YL4 1 A, C Tubulin alpha chain 41807
107 6JCJ 1 A, C Tubulin alpha-1B chain 9823
108 6D88 1 A, C Tubulin alpha-1B chain 9823
109 5YLJ 1 A, C Tubulin alpha-1B chain 9823
110 5XLT 1 A, C Tubulin alpha-1B chain 9913
111 5ZXH 1 A, C Tubulin alpha-1B chain 9823
112 5XKF 1 A, C Tubulin alpha-1B chain 9823
113 6AGK 1 A, C Tubulin alpha-1B chain 9823
114 5H7O 1 A, C Tubulin alpha-1B chain 9823
115 5XIW 1 A, C Tubulin alpha-1B chain 9823
116 6GX7 1 A, C Tubulin alpha chain 9940
117 4HNA 1 A Tubulin alpha chain 9940
118 5XHC 1 A, C Tubulin alpha chain 41807
119 6MZG 1 A, C, G, I Tubulin alpha-1A chain 9823
120 6O5N 1 A, C Tubulin alpha-1B chain 9823
121 4X1I 1 A, C Tubulin alpha chain 9940
122 5XI5 1 A, C Tubulin alpha chain 41807
123 5Z4U 1 A, C Tubulin alpha-1B chain 9823
124 5YLS 1 A, C Tubulin alpha-1B chain 9823
125 4X1Y 1 A, C Tubulin alpha chain 9940
126 5XI7 1 A, C Tubulin alpha chain 41807
127 4X20 1 A, C Tubulin alpha chain 9940
128 5MIO 1 A Tubulin alpha-1B chain 9913
129 4X1K 1 A, C Tubulin alpha chain 9940
130 6GWD 1 A, C, E ALPHA-TUBULIN 9940
131 4EB6 1 A, C Tubulin alpha chain 9940
132 6MZE 1 A, C, H, J, O, Q, V, X Tubulin alpha-1A chain 9823
133 5LP6 1 A, C Tubulin alpha-1B chain 9913
134 3HKE 1 A, C Tubulin alpha chain 9940
135 3HKB 1 A, C Tubulin alpha chain 9940
136 3HKD 1 A, C Tubulin alpha chain 9940
137 3HKC 1 A, C Tubulin alpha chain 9940
138 1SA0 1 A, C Tubulin alpha chain 9913
139 6BBN 1 A, C Tubulin alpha-1B chain 9913
140 3N2G 1 A, C Tubulin alpha chain 9940
141 6GVM 1 A Tubulin alpha chain 9940
142 3E22 1 A, C Tubulin alpha-1C chain 9913
143 1SA1 1 A, C Tubulin alpha chain 9913
144 1Z2B 1 A, C Tubulin alpha chain 9913
145 3DU7 1 A, C Tubulin alpha-1C chain 9913
146 3N2K 1 A, C Tubulin alpha chain 9940
147 4YJ3 1 A, C Tubulin alpha-1B chain 9913
148 4F61 1 A, C, E, G Tubulin alpha chain 9940
149 6MZF 1 A, C, H, J, O, Q, V, X Tubulin alpha-1A chain 9823
150 1FFX 1 A, C PROTEIN (TUBULIN) 9913
151 6VPO 1 A Tubulin alpha-1A chain 9823
152 6VPP 1 A Tubulin alpha-1A chain 9823
153 6TIW 3 A Tubulin alpha-1B chain 9823
154 6TA4 2 A Tubulin alpha-1B chain 9823
155 6RZA 2 A, C Tubulin alpha-1B chain 9823
156 6RZB 1 A Tubulin alpha-1B chain 9823
157 6QVJ 2 O, X Tubulin alpha-1B chain GTP 9606
158 6QVE 1 A, C Tubulin alpha-1B chain GTP 9606
159 6QUS 1 O, X Tubulin alpha-1B chain GTP 9606
160 6QUY 1 A, C Tubulin alpha-1B chain GTP 9606
161 6O2Q 1 A, C, E, J, K, L Tubulin alpha-1B chain 9823
162 6O2R 1 A, C, E, J, K, L Tubulin alpha-1B chain 9823
163 6O2S 1 1A, 1B, 1C, 1D, 1E, 1F, 1G, 1I, 1J, 1K, 1L, 1M, 1N, 2A, 2B, 2C, 2D, 2E, 2F, 2G, 2I, 2J, 2K, 2L, 2M, 2N, 3A, 3B, 3C, 3D, 3E, 3F, 3G, 3I, 3J, 3K, 3L, 3M, 3N, 4A, 4B, 4C, 4D, 4E, 4F, 4G, 4I, 4J, 4K, 4L, 4M, 4N Tubulin alpha-1B chain 9823
164 6O2T 1 1A, 1B, 1C, 1D, 1E, 1F, 1G, 1I, 1J, 1K, 1L, 1M, 1N, 2A, 2B, 2C, 2D, 2E, 2F, 2G, 2I, 2J, 2K, 2L, 2M, 2N, 3A, 3B, 3C, 3D, 3E, 3F, 3G, 3I, 3J, 3K, 3L, 3M, 3N, 4A, 4B, 4C, 4D, 4E, 4F, 4G, 4I, 4J, 4K, 4L, 4M, 4N Tubulin alpha-1B chain 9823
165 6I2I 1 A Tubulin alpha-1B chain 9606
166 6MLQ 1 A Tubulin alpha-1A chain 9823
167 6MLR 1 A Tubulin alpha-1A chain 9823
168 6E7B 2 A Tubulin alpha-1B chain 9606
169 6E7C 2 A Tubulin alpha-1B chain 9606
170 6DPU 1 A, C, E, J, K, L Tubulin alpha-1B chain 9823
171 6DPV 1 A, C, E, J, K, L Tubulin alpha-1B chain 9823
172 6DPW 1 A, C, E, J, K, L Tubulin alpha-1B chain 9823
173 6CVJ 1 A Tubulin alpha-1B chain 9823
174 6CVN 2 B Tubulin alpha-1B chain 9823
175 6BJC 1 A, C, E, J, K, L Tubulin alpha-1B chain 9823
176 6EVX 2 A, C, E, J, K, L Tubulin alpha-1B chain 9823
177 6EVY 1 A, C, E, J, K, L Tubulin alpha-1B chain 9823
178 6EVZ 2 A, C, E, J, K, L Tubulin alpha-1B chain 9823
179 6EW0 1 A, C, E, J, K, L Tubulin alpha-1B chain 9823
180 6EVW 1 A, C, E, J, K, L Tubulin alpha-1B chain 9823
181 6B0C 1 A, C Tubulin alpha-1B chain 9823
182 6B0I 1 A Tubulin alpha-1B chain 9823
183 6B0L 1 A Tubulin alpha-1B chain 9823
184 5OGC 2 A Tubulin alpha chain 9913
185 5XXT 1 A, C, E, G, I, K, M, O, Q Tubulin alpha-1A chain UNP residues 2-439 9823
186 5XXV 1 A, C, E, G, I, K, M, O, Q Tubulin alpha-1A chain UNP residues 2-439 9823
187 5XXW 1 A, C, E, G, I, K, M, O, Q Tubulin alpha-1A chain UNP residues 2-439 9823
188 5XXX 1 A, C, E, G, I, K, M, O, Q Tubulin alpha-1A chain UNP residues 2-439 9823
189 5OCU 2 A Tubulin alpha chain 9913
190 5OAM 2 A Tubulin alpha chain 9913
191 5ND2 2 A Tubulin alpha chain Alpha-tubulin 9913
192 5ND3 2 A Tubulin alpha chain 9913
193 5ND7 2 A Tubulin alpha chain 9913
194 5N5N 2 G, H, I, J, K, L Tubulin alpha-1B chain GTP-bound 9606
195 5MM4 2 A Tubulin alpha-1A chain 9823
196 5MM7 2 A Tubulin alpha-1A chain 9823
197 5M5N 1 A Tubulin alpha-1D chain 9913
198 5M5O 1 A Tubulin alpha-1D chain 9913
199 5M5C 2 A, D Tubulin alpha chain 9913
200 5M5I 1 A Tubulin alpha-1D chain 9913
201 5M5L 1 A Tubulin alpha-1D chain 9913
202 5M5M 1 A Tubulin alpha-1D chain 9913
203 5M50 1 A, D Tubulin alpha chain 9913
204 5M54 2 A, D Tubulin alpha chain 9913
205 5SYF 1 A Tubulin alpha chain 9823
206 5SYG 1 A Tubulin alpha chain 9823
207 5SYC 1 A Tubulin alpha chain 9823
208 5SYE 1 A Tubulin alpha chain 9823
209 5KMG 1 A Tubulin alpha-1B chain 9823
210 5JCO 2 A, B, E, F, G, H Tubulin alpha-1A chain 9606
211 5IJ0 1 A Tubulin alpha-1B chain 9606
212 5IJ9 1 A Tubulin alpha-1B chain 9606
213 5HNW 1 A Tubulin alpha-1B chain 9913
214 5HNX 1 A Tubulin alpha-1B chain 9913
215 5HNY 1 A Tubulin alpha-1B chain UNP residues 2-439 9913
216 5HNZ 1 A Tubulin alpha-1B chain 9913
217 3JAW 1 A, C Tubulin alpha-1B chain 9823
218 3JAT 1 A, C, E, J, K, L Tubulin alpha-1B chain 9823
219 3JAR 1 A, C, E, J, K, L Tubulin alpha-1B chain 9823
220 3JAS 1 A, C, E, J, K, L Tubulin alpha-1B chain 9823
221 3JAO 1 A Tubulin alpha 1A chain SEE REMARK 999 5911
222 3JAK 1 A, C, E, J, K, L Tubulin alpha-1B chain 9823
223 3JAL 1 A, C, E, J, K, L Tubulin alpha-1B chain 9823
224 3J8X 2 A Tubulin alpha-1B chain 9823
225 3J8Y 2 A Tubulin alpha-1B chain 9823
226 4UXO 1 A TUBULIN ALPHA-1B CHAIN 9913
227 4UXP 1 A TUBULIN ALPHA-1B CHAIN 9913
228 4UXR 1 A TUBULIN ALPHA-1B CHAIN 9913
229 4UXS 1 A TUBULIN ALPHA-1B CHAIN 9913
230 4UXT 1 A TUBULIN ALPHA-1B CHAIN 9913
231 4UXY 1 A ALPHA TUBULIN 9913
232 4UY0 1 A TUBULIN ALPHA-1B CHAIN 9913
233 3J7I 1 A Tubulin alpha-1A chain 9823
234 3J6P 2 A Tubulin alpha-1A chain 9823
235 3J6H 1 A Tubulin alpha-1A chain UNP residues 2-437 9823
236 3J6F 1 A, C, E, G, I, K, M, O, Q Tubulin alpha-1A chain 9823
237 3J6G 1 A, C, E, G, I, K, M, O, Q Tubulin alpha-1A chain 9823
238 3J6E 1 A, C, E, G, I, K, M, O, Q Tubulin alpha-1A chain 9823
239 4CK5 1 A TUBULIN ALPHA-1D CHAIN 9913
240 4CK6 1 A TUBULIN ALPHA-1D CHAIN 9913
241 4CK7 1 A TUBULIN ALPHA-1D CHAIN 9913
242 3J2U 2 A, C Tubulin alpha-1A chain 9913
243 3J1T 2 B Tubulin alpha-1B chain 9913
244 3J1U 2 B Tubulin alpha-1B chain 9913
245 4ATX 2 B TUBULIN ALPHA-1D CHAIN 9913 3.6.5.6 | Details
246 4ATU 2 B, D, F, H TUBULIN ALPHA-1D CHAIN 9913 3.6.5.6 | Details
247 4AQV 1 A TUBULIN ALPHA-1D CHAIN 9913
248 4AQW 1 A TUBULIN ALPHA-1D CHAIN 9913
249 4ABO 2 B, D, F, H TUBULIN ALPHA-1A CHAIN 9823 3.6.5.6 | Details
250 2XRP 2 B, D, F, H TUBULIN ALPHA-1D CHAIN 9913 3.6.5.6 | Details
251 3IZ0 1 A alpha tubulin, Chain A from PDB 1JFF 9913
252 2WBE 1 A TUBULIN ALPHA-1D CHAIN 9913
253 3EDL 1 A Alpha-tubulin 9913
254 3EDL 4 F Alpha-tubulin 9913
255 3DCO 2 A Bovine Alpha Tubulin Alpha Tubulin Subunit 9913
256 2P4N 2 A Tubulin alpha chain 9823
257 2HXF 1 A Tubulin alpha chain 9823
258 2HXH 1 A Tubulin alpha chain 9823
259 1TVK 1 A Tubulin alpha chain see REMARK 400 9913
260 1JFF 1 A tubulin alpha chain 9913
261 1IA0 1 A TUBULIN ALPHA CHAIN 9823
262 1TUB 1 A TUBULIN 9823