Sequence Similarity Clusters for the Entities in PDB 4M8L

Entity #1 | Chains: A,B,C,D
Ribose-5-phosphate isomerase A protein, length: 224 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 3 8009
95 % 3 3 9153 Flexibility: Low
Max RMSD: 1.1, Avg RMSD: 0.6
PDBFlex
90 % 3 3 9061
70 % 3 3 8822
50 % 15 16 2094
40 % 24 26 1239
30 % 27 29 1187

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures