Sequence Similarity Clusters for the Entities in PDB 4M8K

Entity #1 | Chains: A,B
hypothetical protein, GDSL-like Lipase/Acylhydrolase family protein protein, length: 236 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 48506
95 % 1 1 36396 Flexibility: No
Max RMSD: 0.2, Avg RMSD: 0.2
PDBFlex
90 % 1 1 30049
70 % 1 1 27090
50 % 1 2 9654
40 % 1 2 9567
30 % 1 2 8886

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 4M8K 1 A, B hypothetical protein, GDSL-like Lipase/Acylhydrolase family protein 820
2 4NRD 1 A, B, C, D, E, F Uncharacterized protein 28116