Sequence Similarity Clusters for the Entities in PDB 4M8K

Entity #1 | Chains: A,B
hypothetical protein, GDSL-like Lipase/Acylhydrolase family protein protein, length: 236 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 48330
95 % 1 1 31139 Flexibility: No
Max RMSD: 0.2, Avg RMSD: 0.2
PDBFlex
90 % 1 1 29930
70 % 1 1 26979
50 % 1 2 10076
40 % 1 2 9811
30 % 1 2 8835

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures