Sequence Similarity Clusters for the Entities in PDB 4M7K

Entity #1 | Chains: L
10H10 light chain protein, length: 220 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 50136
95 % 1 2 30620 Flexibility: Low
Max RMSD: 0.7, Avg RMSD: 0.7
PDBFlex
90 % 110 553 4
70 % 448 2416 2
50 % 556 3067 2
40 % 556 3067 2
30 % 1143 6228 1
Entity #2 | Chains: H
10H10 heavy chain protein, length: 229 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 50133
95 % 1 2 34807 Flexibility: Low
Max RMSD: 1.0, Avg RMSD: 1.0
PDBFlex
90 % 3 11 5718
70 % 546 2965 1
50 % 579 3117 1
40 % 579 3117 1
30 % 1144 6228 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures