Sequence Similarity Clusters for the Entities in PDB 4M7J

Entity #1 | Chains: H
S25-26 Fab (IgG1k) heavy chain protein, length: 219 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 4 11104
95 % 4 8 6295 Flexibility: Low
Max RMSD: 7.1, Avg RMSD: 3.0
PDBFlex
90 % 5 16 3770
70 % 684 2943 1
50 % 731 3094 1
40 % 731 3094 1
30 % 1440 6183 1
Entity #2 | Chains: L
S25-26 Fab (Igg1k) light chain protein, length: 219 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 4 10769
95 % 54 164 166 Flexibility: Low
Max RMSD: 6.3, Avg RMSD: 2.4
PDBFlex
90 % 58 174 155
70 % 548 2399 2
50 % 697 3045 2
40 % 697 3045 2
30 % 1441 6183 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures