Sequence Similarity Clusters for the Entities in PDB 4M0W

Entity #1 | Chains: A
Replicase polyprotein 1a protein, length: 327 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 83802
95 % 1 13 4002 Flexibility: Low
Max RMSD: 7.4, Avg RMSD: 1.9
PDBFlex
90 % 1 13 4067
70 % 1 13 4045
50 % 1 13 3958
40 % 1 13 3938
30 % 1 26 2024
Entity #2 | Chains: B
Ubiquitin protein, length: 76 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 12 399 4
95 % 16 497 6 Flexibility: Low
Max RMSD: 12.4, Avg RMSD: 1.4
PDBFlex
90 % 16 510 6
70 % 18 561 9
50 % 18 577 10
40 % 18 581 12
30 % 18 598 20

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures