Sequence Similarity Clusters for the Entities in PDB 4LX2

Entity #1 | Chains: A
Unconventional myosin-Va protein, length: 392 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 5 8911
95 % 1 8 3656 Flexibility: Low
Max RMSD: 1.8, Avg RMSD: 0.9
PDBFlex
90 % 1 8 3746
70 % 1 12 2796
50 % 1 12 2791
40 % 1 12 2800
30 % 1 12 2775
Entity #2 | Chains: B
Melanophilin protein, length: 26 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 65153
95 % 1 1 49452
90 % 1 1 46927
70 % 1 1 42434
50 % 1 1 35601
40 % 1 1 32262
30 % 1 1 29301

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures