Sequence Similarity Clusters for the Entities in PDB 4LV8

Entity #1 | Chains: A
Rhoptry protein 5 C protein, length: 371 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 69870
95 % 3 4 22913 Flexibility: Low
Max RMSD: 1.5, Avg RMSD: 1.3
PDBFlex
90 % 3 4 22233
70 % 3 4 20393
50 % 3 4 18048
40 % 3 4 16627
30 % 3 4 14046
Entity #2 | Chains: B
Interferon-inducible GTPase 1 protein, length: 423 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 56008
95 % 2 8 4831 Flexibility: Low
Max RMSD: 2.1, Avg RMSD: 1.4
PDBFlex
90 % 2 8 4890
70 % 2 8 4835
50 % 2 8 4704
40 % 2 8 4613
30 % 2 8 4477

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures