Sequence Similarity Clusters for the Entities in PDB 4LKX

Entity #1 | Chains: A
Fab fragment heavy chain protein, length: 225 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 79863
95 % 1 1 51586
90 % 6 42 777
70 % 434 2928 1
50 % 462 3079 1
40 % 462 3079 1
30 % 911 6153 1
Entity #2 | Chains: B
Fab fragment light chain protein, length: 219 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 68639
95 % 1 27 1431 Flexibility: Low
Max RMSD: 3.8, Avg RMSD: 1.3
PDBFlex
90 % 18 109 274
70 % 353 2391 2
50 % 443 3030 2
40 % 443 3030 2
30 % 912 6153 1
Entity #3 | Chains: R
CemX segment protein, length: 14 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures