Sequence Similarity Clusters for the Entities in PDB 4KXQ

Entity #1 | Chains: A
NAD-dependent protein deacetylase sirtuin-1 protein, length: 281 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 3 15728
95 % 1 4 11105 Flexibility: Low
Max RMSD: 3.8, Avg RMSD: 2.4
PDBFlex
90 % 1 4 11022
70 % 1 4 10586
50 % 1 4 9743
40 % 1 4 9227
30 % 1 4 8538
Entity #2 | Chains: B
NAD-dependent protein deacetylase sirtuin-1 protein, length: 30 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 3 13943
95 % 1 3 13357 Flexibility: Low
Max RMSD: 3.7, Avg RMSD: 2.4
PDBFlex
90 % 1 3 13178
70 % 1 3 12554
50 % 1 3 11473
40 % 1 3 10765
30 % 1 3 9888

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures