Sequence Similarity Clusters for the Entities in PDB 4KN9

Entity #1 | Chains: S,T
Periplasmic [NiFeSe] hydrogenase small subunit protein, length: 283 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 6 7046
95 % 1 7 6543 Flexibility: No
Max RMSD: 1.0, Avg RMSD: 0.3
PDBFlex
90 % 1 7 6567
70 % 1 7 6278
50 % 5 15 3756
40 % 5 15 3744
30 % 24 68 528
Entity #2 | Chains: L,M
Nickel-dependent hydrogenase large subunit protein, length: 499 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 6 6445
95 % 1 7 6562 Flexibility: No
Max RMSD: 0.3, Avg RMSD: 0.2
PDBFlex
90 % 1 7 6585
70 % 1 7 6490
50 % 10 21 2867
40 % 10 21 2863
30 % 10 21 2837

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures