Sequence Similarity Clusters for the Entities in PDB 4KMD

Entity #1 | Chains: A
Sufu protein, length: 444 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 55049
95 % 1 2 41280 Flexibility: Medium
Max RMSD: 6.9, Avg RMSD: 6.9
PDBFlex
90 % 1 4 17296
70 % 1 4 14675
50 % 1 4 14541
40 % 1 4 13531
30 % 1 5 10463
Entity #2 | Chains: B
Zinc finger protein GLI1 protein, length: 17 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures