4KKO

Crystal Structure of HIV-1 Reverse Transcriptase in Complex with 4-((4-methoxy-6-(2-morpholinoethoxy)-1,3,5-triazin-2-yl)amino)-2-((3-methylbut-2-en-1-yl)oxy)benzonitrile (JLJ513), a non-nucleoside inhibitor


Sequence Similarity Clusters for the Entities in PDB 4KKO

Entity #1 | Chains: A
HIV-1 reverse transcriptase, p66 subunit protein, length: 557 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 40 43 1146
95 % 233 292 111 Flexibility: Medium
Max RMSD: 23.5, Avg RMSD: 3.7
PDBFlex
90 % 233 292 117
70 % 233 292 129
50 % 234 293 151
40 % 235 294 165
30 % 235 294 170
Entity #2 | Chains: B
HIV-1 reverse transcriptase, p51 subunit protein, length: 428 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 98 131 206
95 % 228 286 115 Flexibility: Low
Max RMSD: 13.7, Avg RMSD: 1.5
PDBFlex
90 % 228 286 120
70 % 228 286 134
50 % 229 287 158
40 % 230 288 172
30 % 230 288 176

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures