Sequence Similarity Clusters for the Entities in PDB 4KFC

Entity #1 | Chains: A,B
KDP operon transcriptional regulatory protein KdpE protein, length: 227 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 35654
95 % 1 2 22366 Flexibility: High
Max RMSD: 19.1, Avg RMSD: 12.8
PDBFlex
90 % 1 2 21712
70 % 1 2 19918
50 % 1 2 17651
40 % 1 2 16233
30 % 14 19 1549
Entity #2 | Chains: Y
Promoter DNA dna, length: 30 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #3 | Chains: Z
Promoter DNA dna, length: 30 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures