Sequence Similarity Clusters for the Entities in PDB 4K3I

Entity #1 | Chains: A,B
Methylamine utilization protein MauG protein, length: 373 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 5 15 1686
95 % 12 28 1047 Flexibility: No
Max RMSD: 1.4, Avg RMSD: 0.4
PDBFlex
90 % 12 28 1079
70 % 12 28 1123
50 % 12 28 1175
40 % 12 28 1218
30 % 12 28 1255
Entity #2 | Chains: C,E
Methylamine dehydrogenase light chain protein, length: 137 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 14 37 459
95 % 14 40 602 Flexibility: No
Max RMSD: 0.9, Avg RMSD: 0.4
PDBFlex
90 % 14 40 631
70 % 14 40 662
50 % 14 40 710
40 % 14 40 753
30 % 14 40 783
Entity #3 | Chains: D,F
Methylamine dehydrogenase heavy chain protein, length: 385 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 14 34 533
95 % 14 37 631 Flexibility: Low
Max RMSD: 1.0, Avg RMSD: 0.5
PDBFlex
90 % 14 37 661
70 % 14 38 670
50 % 14 38 718
40 % 14 42 704
30 % 14 42 745

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures