Sequence Similarity Clusters for the Entities in PDB 4JZN

Entity #1 | Chains: A,C,I
Anti-HCV E2 Fab HC84-1 heavy chain protein, length: 261 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 33774
95 % 1 2 13217 Flexibility: Low
Max RMSD: 1.5, Avg RMSD: 1.0
PDBFlex
90 % 1 2 12229
70 % 754 2943 1
50 % 802 3094 1
40 % 802 3094 1
30 % 1586 6183 1
Entity #2 | Chains: B,D,P
Anti-HCV E2 Fab HC84-1 light chain protein, length: 215 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 33775
95 % 1 2 17350 Flexibility: Low
Max RMSD: 1.7, Avg RMSD: 1.0
PDBFlex
90 % 2 5 6616
70 % 607 2399 2
50 % 772 3045 2
40 % 772 3045 2
30 % 1587 6183 1
Entity #3 | Chains: K
Envelope glycoprotein E2 protein, length: 13 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures