Sequence Similarity Clusters for the Entities in PDB 4JZF

Entity #1 | Chains: H
Factor VIIa (Heavy Chain) protein, length: 254 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 30 97 418
95 % 31 101 526 Flexibility: Low
Max RMSD: 4.1, Avg RMSD: 0.6
PDBFlex
90 % 31 101 562
70 % 31 101 598
50 % 31 101 626
40 % 91 290 187
30 % 899 1948 6
Entity #2 | Chains: L
Factor VIIa (Light Chain) protein, length: 55 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 8 30 1854
95 % 8 30 2413 Flexibility: No
Max RMSD: 1.8, Avg RMSD: 0.3
PDBFlex
90 % 8 30 2427
70 % 8 30 2522
50 % 8 30 2495
40 % 8 30 2521
30 % 8 30 2501

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures