Sequence Similarity Clusters for the Entities in PDB 4JGS

Entity #1 | Chains: A,B,C,D,E,F,G,H,I
MLV-related proviral Env polyprotein protein, length: 105 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 8294
95 % 1 1 8874 Flexibility: No
Max RMSD: 0.9, Avg RMSD: 0.4
PDBFlex
90 % 1 1 8811
70 % 1 1 8591
50 % 1 1 8016
40 % 2 2 6877
30 % 2 2 6449

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures