Sequence Similarity Clusters for the Entities in PDB 4J4J

Entity #1 | Chains: A,B
DNA dC->dU-editing enzyme APOBEC-3F protein, length: 209 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 3 14178
95 % 3 3 14395 Flexibility: Low
Max RMSD: 2.1, Avg RMSD: 1.1
PDBFlex
90 % 3 3 14165
70 % 9 11 2298
50 % 9 11 2333
40 % 9 11 2347
30 % 9 11 2356

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures