Sequence Similarity Clusters for the Entities in PDB 4J1P

Entity #1 | Chains: A
Bromodomain containing 2, isoform CRA_a protein, length: 114 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 16 2099
95 % 3 35 1142 Flexibility: Low
Max RMSD: 3.9, Avg RMSD: 0.5
PDBFlex
90 % 3 35 1163
70 % 3 75 444
50 % 3 75 512
40 % 7 540 31
30 % 8 1084 11

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures