Sequence Similarity Clusters for the Entities in PDB 4J1P

Entity #1 | Chains: A
Bromodomain containing 2, isoform CRA_a protein, length: 114 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 17 1669
95 % 3 36 1048 Flexibility: Low
Max RMSD: 3.9, Avg RMSD: 0.5
PDBFlex
90 % 3 36 1080
70 % 3 76 426
50 % 3 76 493
40 % 7 550 31
30 % 8 1099 11

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures