Sequence Similarity Clusters for the Entities in PDB 4IOP

Entity #1 | Chains: A
C-type lectin domain family 2 member A protein, length: 142 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 61224
95 % 1 1 45228
90 % 1 1 42981
70 % 1 1 37900
50 % 7 7 6448
40 % 7 7 6258
30 % 10 11 2737
Entity #2 | Chains: B
Killer cell lectin-like receptor subfamily F member 2 protein, length: 158 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 68442
95 % 1 1 49560
90 % 1 1 46965
70 % 1 1 41239
50 % 1 1 35694
40 % 1 1 32250
30 % 11 11 2737

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 4QKI 1 A, B C-type lectin domain family 2 member D extracellular part, UNP residues 72-191 9606
2 4QKH 1 A, B C-type lectin domain family 2 member D extracellular part, UNP residues 72-191 9606
3 5MGT 1 A, B C-type lectin domain family 2 member D 9606
4 4QKG 1 A C-type lectin domain family 2 member D extracellular part, UNP residues 72-191 9606
5 4WCO 1 A, B, C C-type lectin domain family 2 member D UNP residues 71-191 9606
6 4QKJ 1 A C-type lectin domain family 2 member D extracellular part, UNP residues 72-191 9606
7 4IOP 1 A C-type lectin domain family 2 member A 9606