Sequence Similarity Clusters for the Entities in PDB 4IOP

Entity #1 | Chains: A
C-type lectin domain family 2 member A protein, length: 142 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 64881
95 % 1 1 49216
90 % 1 1 46640
70 % 1 1 40969
50 % 7 7 6647
40 % 7 7 6428
30 % 10 11 2777
Entity #2 | Chains: B
Killer cell lectin-like receptor subfamily F member 2 protein, length: 158 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 67936
95 % 1 1 49215
90 % 1 1 46639
70 % 1 1 40968
50 % 1 1 35424
40 % 1 1 32054
30 % 11 11 2777

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures