Sequence Similarity Clusters for the Entities in PDB 4IMQ

Entity #1 | Chains: A
3C-like protease protein, length: 183 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 7 26 1030
95 % 7 27 1405 Flexibility: Low
Max RMSD: 2.8, Avg RMSD: 0.9
PDBFlex
90 % 7 29 1253
70 % 7 29 1288
50 % 7 36 856
40 % 7 36 902
30 % 7 36 936
Entity #2 | Chains: B
PEPTIDE INHIBITOR, syc8 protein, length: 4 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

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Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 5DGJ 1 A 3C-LIKE PROTEASE UNP residues 1101-1281 11983 3.4.22.66 | Details
2 6BID 1 A 3C-like protease UNP residues 1101-1281 11983 3.4.22.66 | Details
3 5E0J 1 A Norovirus 3C-like protease UNP residues 1101-1281 11983 3.4.22.66 | Details
4 5E0G 1 A Norovirus 3C-like protease UNP residues 1101-1281 11983 3.4.22.66 | Details
5 5TG1 1 A 3C-LIKE PROTEASE Residues MHHHHHH are from the purification tag. UNP residues 1101-1281 11983 3.4.22.66 | Details
6 4XBD 1 A, B 3C-LIKE PROTEASE 11983 3.4.22.66 | Details
7 4IMQ 1 A 3C-like protease norwalk virus protease (unp residues 1101-1281) 11983 3.4.22.66 | Details
8 3UR6 1 A, B 3C-like protease unp residues 1101-1281 11983 3.4.22.66 | Details
9 2FYQ 1 A Chymotrypsin-like cysteine proteinase 11983
10 4XBC 1 A 3C-LIKE PROTEASE 11983 3.4.22.66 | Details
11 4ASH 1 A, B NS6 PROTEASE DERIVES FROM POLYPROTEIN RESIDUES 995-1177 11983 3.4.22.66 | Details
12 3UR9 1 A, B 3C-like protease unp residues 1101-1281 11983 3.4.22.66 | Details
13 4IMZ 1 A Genome polyprotein norwalk virus protease (unp residues 1101-1281) 11983 2.7.7.48 | Details 3.4.22.66 | Details 3.6.1.15 | Details
14 4INH 1 A, B, C, D, E, F, G, H Genome polyprotein norwalk virus protease (unp residues 1101-1281) 11983 2.7.7.48 | Details 3.4.22.66 | Details 3.6.1.15 | Details
15 5TG2 1 A 3C-LIKE PROTEASE UNP residues 1101-1281 11983 3.4.22.66 | Details
16 4XBB 1 A 3C-LIKE PROTEASE 11983 3.4.22.66 | Details
17 2IPH 1 A, B Thiol protease P3C 11983 3.4.22 | Details
18 5T6F 1 A, B Genome polyprotein N-terminal residues MHHHHHH are from the purification tag. Full Length (UNP residues 1101-1281) 11983 2.7.7.48 | Details 3.4.22.66 | Details 3.6.1.15 | Details
19 5E0H 1 A, B Norovirus 3C-like protease UNP residues 1101-1281 11983 3.4.22.66 | Details
20 6BIB 1 A, B 3C-like protease UNP residues 1101-1281 11983 3.4.22.66 | Details
21 5WEJ 1 A, B Genome polyprotein The N-terminal residues (MHHHHHH) are part of the purification tag. Full length enzyme (UNP residues 1101-1281) 11983 2.7.7.48 | Details 3.4.22.66 | Details 3.6.1.15 | Details
22 4IN1 1 A 3C-like protease norwalk virus protease (unp residues 1101-1281) 11983 3.4.22.66 | Details
23 5T6D 1 A, B Genome polyprotein N-terminal residues MHHHHHH are from the purification tag. Full Length (UNP residues 1101-1281) 11983 2.7.7.48 | Details 3.4.22.66 | Details 3.6.1.15 | Details
24 2FYR 1 A Chymotrypsin-like cysteine proteinase 11983
25 6B6I 1 A, B, C, D, E, F, G, H 3C-like protease UNP residues 982-1162 11983
26 4IN2 1 A, B C-like protease norwalk virus protease (unp residues 1100-1281) 11983 3.4.22.66 | Details
27 6BIC 1 A, B 3C-like protease UNP residues 1101-1281 11983 3.4.22.66 | Details
28 5T6G 1 A, B Genome polyprotein N-terminal residues MHHHHHH are from the purification tag. Full Length (UNP residues 1101-1281) 11983 2.7.7.48 | Details 3.4.22.66 | Details 3.6.1.15 | Details
29 5DG6 1 A, B 3C-LIKE PROTEASE UNP residues 1101-1281 11983 3.4.22.66 | Details
30 4X2V 1 A, B, C, D NS6 Protease UNP residues 995-1178 11983
31 4X2Y 1 A, B NS6 Protease,NS6 Protease UNP residues 998-1173,UNP residues 338-340 11983
32 4X2X 1 A NS6 protease UNP residues 998-1173 11983
33 6NIR 1 A, B, C, D HOV protease 142786
34 1WQS 1 A, B, C, D 3C-like protease residues 1-173 11983
35 4X2W 1 A, B NS6 Protease UNP residues 997-1175 11983
36 2LNC 1 A 3C-like protease 11983 3.4.22.66 | Details