Sequence Similarity Clusters for the Entities in PDB 4IK1

Entity #1 | Chains: A
RCaMP, Green fluorescent protein protein, length: 450 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 51639
95 % 10 24 2810 Flexibility: Medium
Max RMSD: 17.9, Avg RMSD: 8.5
PDBFlex
90 % 10 24 2869
70 % 10 24 3022
50 % 10 24 2927
40 % 10 27 2486
30 % 10 27 2460

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures