Sequence Similarity Clusters for the Entities in PDB 4I04

Entity #1 | Chains: A,B,C,D
Cathepsin B-like peptidase (C01 family) protein, length: 323 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 21135
95 % 1 1 20119 Flexibility: No
Max RMSD: 0.4, Avg RMSD: 0.3
PDBFlex
90 % 1 1 19646
70 % 1 1 18163
50 % 1 5 8254
40 % 2 10 4096
30 % 2 10 4082

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures