Sequence Similarity Clusters for the Entities in PDB 4HNJ

Entity #1 | Chains: A,B
Bcl-2-like protein 1 protein, length: 212 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 6 11813
95 % 21 29 1848 Flexibility: Medium
Max RMSD: 22.5, Avg RMSD: 6.2
PDBFlex
90 % 22 30 1375
70 % 22 30 1407
50 % 22 30 1424
40 % 22 30 1468
30 % 22 30 1504
Entity #2 | Chains: C
Bcl-2-binding component 3 protein, length: 25 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 3 32044
95 % 2 3 25946 Flexibility: Low
Max RMSD: 0.6, Avg RMSD: 0.6
PDBFlex
90 % 3 5 13575
70 % 7 9 6516
50 % 7 9 6286
40 % 7 9 6050
30 % 7 9 5750

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures