Sequence Similarity Clusters for the Entities in PDB 4HIJ

Entity #1 | Chains: A,C
Fab 023.102 light chain protein, length: 219 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 4 13140
95 % 41 109 230 Flexibility: Low
Max RMSD: 6.2, Avg RMSD: 1.8
PDBFlex
90 % 85 233 78
70 % 949 2367 2
50 % 1197 3002 2
40 % 1197 3002 2
30 % 2447 6093 1
Entity #2 | Chains: B,D
Fab 023.102 heavy chain protein, length: 231 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 4 13173
95 % 3 4 13030 Flexibility: No
Max RMSD: 0.6, Avg RMSD: 0.4
PDBFlex
90 % 3 4 12867
70 % 1164 2902 1
50 % 1227 3034 1
40 % 1235 3047 1
30 % 2448 6093 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures