Sequence Similarity Clusters for the Entities in PDB 4H9N

Entity #1 | Chains: A
Histone H3.3 protein, length: 135 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 42767
95 % 2 230 63 Flexibility: Low
Max RMSD: 11.4, Avg RMSD: 1.1
PDBFlex
90 % 2 238 64
70 % 2 241 70
50 % 2 250 91
40 % 2 250 103
30 % 2 250 104
Entity #2 | Chains: B
Histone H4 protein, length: 102 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 233 40
95 % 2 255 39 Flexibility: Low
Max RMSD: 13.3, Avg RMSD: 1.1
PDBFlex
90 % 2 264 37
70 % 2 263 48
50 % 2 263 84
40 % 2 263 98
30 % 2 263 99
Entity #3 | Chains: C
Death domain-associated protein 6 protein, length: 212 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 6 12558
95 % 1 8 9708 Flexibility: Low
Max RMSD: 1.7, Avg RMSD: 1.1
PDBFlex
90 % 1 8 9636
70 % 1 8 9339
50 % 1 8 8711
40 % 1 8 8345
30 % 1 8 7793

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures