Sequence Similarity Clusters for the Entities in PDB 4GOK

Entity #1 | Chains: A,B
ADP-ribosylation factor-like protein 2 protein, length: 169 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 45302
95 % 5 6 12030 Flexibility: Low
Max RMSD: 6.3, Avg RMSD: 1.1
PDBFlex
90 % 5 6 12031
70 % 5 6 11587
50 % 11 12 4577
40 % 16 17 2860
30 % 16 17 2831
Entity #2 | Chains: C,G
Protein unc-119 homolog A protein, length: 240 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 23609
95 % 2 2 20872 Flexibility: Low
Max RMSD: 1.2, Avg RMSD: 0.9
PDBFlex
90 % 2 2 20382
70 % 2 2 18756
50 % 2 2 16695
40 % 2 2 15412
30 % 2 2 13846

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures