Sequence Similarity Clusters for the Entities in PDB 4GH7

Entity #1 | Chains: A,C
Neutrophil gelatinase-associated lipocalin protein, length: 188 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 41373
95 % 1 1 36228 Flexibility: Low
Max RMSD: 0.6, Avg RMSD: 0.6
PDBFlex
90 % 1 1 34617
70 % 31 45 419
50 % 31 45 469
40 % 31 45 498
30 % 40 54 446
Entity #2 | Chains: B,D
Fibronectin protein, length: 285 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 18211
95 % 1 2 17466 Flexibility: Low
Max RMSD: 4.1, Avg RMSD: 2.9
PDBFlex
90 % 1 2 17165
70 % 1 2 16014
50 % 1 2 14438
40 % 1 2 13432
30 % 2 4 9491

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures