Sequence Similarity Clusters for the Entities in PDB 4GGM

Entity #1 | Chains: X
UDP-2,3-diacylglucosamine pyrophosphatase LpxI protein, length: 283 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 82960
95 % 2 2 40611 Flexibility: High
Max RMSD: 13.2, Avg RMSD: 13.2
PDBFlex
90 % 2 2 38791
70 % 2 2 27029
50 % 2 2 29867
40 % 2 2 27086
30 % 2 2 24014

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures