Sequence Similarity Clusters for the Entities in PDB 4GFU

Entity #1 | Chains: A
Tyrosine-protein phosphatase non-receptor type 18 protein, length: 297 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 3 12403
95 % 2 4 10332 Flexibility: Low
Max RMSD: 1.1, Avg RMSD: 0.6
PDBFlex
90 % 2 4 10231
70 % 2 4 9839
50 % 2 4 9088
40 % 2 4 8683
30 % 59 119 376
Entity #2 | Chains: F
HER2-pY1248 phosphor-peptide protein, length: 7 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures