Sequence Similarity Clusters for the Entities in PDB 4GBP

Entity #1 | Chains: A
Histo-blood group ABO system transferase protein, length: 293 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 31 32 1574
95 % 136 148 261 Flexibility: Low
Max RMSD: 2.5, Avg RMSD: 0.5
PDBFlex
90 % 136 148 278
70 % 136 148 324
50 % 136 148 380
40 % 150 176 274
30 % 150 176 294

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures