Sequence Similarity Clusters for the Entities in PDB 4G28

Entity #1 | Chains: B
Small conductance calcium-activated potassium channel protein 2 protein, length: 102 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 9 9277
95 % 3 13 6198 Flexibility: No
Max RMSD: 2.7, Avg RMSD: 0.5
PDBFlex
90 % 3 13 6355
70 % 3 13 6271
50 % 3 13 5905
40 % 3 13 5849
30 % 3 13 5562
Entity #2 | Chains: R
Calmodulin protein, length: 149 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 14 178 97
95 % 15 223 79 Flexibility: Medium
Max RMSD: 20.3, Avg RMSD: 9.8
PDBFlex
90 % 16 230 82
70 % 21 235 86
50 % 21 244 106
40 % 21 351 65
30 % 21 352 68

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures