Sequence Similarity Clusters for the Entities in PDB 4FQ2

Entity #1 | Chains: H
Fab heavy chain protein, length: 244 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 6 8391
95 % 1 6 8930 Flexibility: Low
Max RMSD: 1.1, Avg RMSD: 0.8
PDBFlex
90 % 2 30 1577
70 % 425 2790 1
50 % 451 2933 1
40 % 451 2933 1
30 % 889 5868 1
Entity #2 | Chains: L
Fab light chain protein, length: 214 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 6 8423
95 % 1 29 1761 Flexibility: Low
Max RMSD: 1.9, Avg RMSD: 0.9
PDBFlex
90 % 1 30 1692
70 % 82 583 7
50 % 433 2893 2
40 % 433 2893 2
30 % 890 5868 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures