Sequence Similarity Clusters for the Entities in PDB 4ELZ

Entity #1 | Chains: A,B
DNA gyrase subunit A protein, length: 153 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 44673
95 % 1 1 34778 Flexibility: Low
Max RMSD: 0.9, Avg RMSD: 0.9
PDBFlex
90 % 1 1 33262
70 % 2 2 18600
50 % 2 2 16573
40 % 2 2 15303
30 % 2 2 13746
Entity #2 | Chains: C,D
CcdB protein, length: 105 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 5 6 7427
95 % 5 6 8058 Flexibility: Low
Max RMSD: 1.8, Avg RMSD: 0.8
PDBFlex
90 % 5 6 8014
70 % 5 6 7873
50 % 5 6 7387
40 % 8 13 2374
30 % 8 13 2355

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures