Sequence Similarity Clusters for the Entities in PDB 4EGC

Entity #1 | Chains: A
Maltose-binding periplasmic protein, Homeobox protein SIX1 chimera protein, length: 559 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 79597
95 % 1 1 52809
90 % 1 1 48485
70 % 1 1 42504
50 % 4 14 2450
40 % 4 14 2474
30 % 4 14 2455
Entity #2 | Chains: B
Eyes absent homolog 2 protein, length: 294 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 23160
95 % 1 5 5077 Flexibility: Low
Max RMSD: 1.9, Avg RMSD: 1.1
PDBFlex
90 % 1 5 4927
70 % 1 5 4864
50 % 1 5 4740
40 % 1 5 4794
30 % 1 5 4619

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures