Sequence Similarity Clusters for the Entities in PDB 4E6K

Entity #1 | Chains: A,B,C,D,E,F
Bacterioferritin protein, length: 158 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 9 14 188
95 % 16 29 71 Flexibility: No
Max RMSD: 0.6, Avg RMSD: 0.2
PDBFlex
90 % 16 29 76
70 % 17 33 81
50 % 28 60 51
40 % 33 67 56
30 % 33 68 56
Entity #2 | Chains: G,H,I
bacterioferritin-associated ferredoxin protein, length: 73 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 33321
95 % 1 1 30014 Flexibility: No
Max RMSD: 0.2, Avg RMSD: 0.2
PDBFlex
90 % 1 1 28874
70 % 1 1 26084
50 % 1 1 22924
40 % 1 1 20945
30 % 1 1 18782

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures