Sequence Similarity Clusters for the Entities in PDB 4DJH

Entity #1 | Chains: A,B
Kappa-type opioid receptor, Lysozyme protein, length: 480 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 38579
95 % 1 1 31305 Flexibility: Medium
Max RMSD: 8.3, Avg RMSD: 8.3
PDBFlex
90 % 1 1 30047
70 % 2 3 17341
50 % 30 54 988
40 % 39 67 826
30 % 85 139 431

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures