Sequence Similarity Clusters for the Entities in PDB 4DA9

Entity #1 | Chains: A,B,C,D
Short-chain dehydrogenase/reductase protein, length: 280 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 21776
95 % 1 1 21152 Flexibility: Low
Max RMSD: 1.2, Avg RMSD: 0.8
PDBFlex
90 % 1 1 20602
70 % 1 1 18978
50 % 3 3 6902
40 % 3 3 6677
30 % 670 836 3

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures