Sequence Similarity Clusters for the Entities in PDB 4D4U

Entity #1 | Chains: A,B
FUCOSE-SPECIFIC LECTIN FLEA protein, length: 315 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 5 10 3116
95 % 6 11 3073 Flexibility: No
Max RMSD: 0.4, Avg RMSD: 0.3
PDBFlex
90 % 6 11 3145
70 % 7 14 1686
50 % 7 14 1717
40 % 7 14 1773
30 % 10 19 1561

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures